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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs28480128 chr7:76409205 A/G 2.03E-9 480 15.3 16.77 15.67 KM Plot
THCA rs28489514 chr9:36026649 A/G 9.08E-6 472 15.9 15.08 17.93 KM Plot
THCA rs284914 chr6:119135410 C/T 0.000266 484 16.23 14.27 21.77 KM Plot
THCA rs284915 chr6:119144571 T/C 0.000278 484 16.27 14.25 21.77 KM Plot
THCA rs284918 chr6:119151172 A/G 0.000266 484 16.23 14.27 21.77 KM Plot
THCA rs284920 chr6:119149600 G/A 0.000266 484 16.23 14.27 21.77 KM Plot
THCA rs2850075 chr21:37472156 G/A 5.45E-12 469 16.63 14.55 12.2 KM Plot
THCA rs28501589 chr15:41282534 G/A 0.000184 485 15.02 16.33 17 KM Plot
THCA rs28502389 chr11:62606145 G/T 8.34E-5 490 16.23 14.17 14.27 KM Plot
THCA rs2853765 chr10:7830675 C/G 3.01E-6 490 17.77 16.57 15.48 KM Plot
THCA rs28547509 chr8:52434584 A/G 1.52E-6 487 14.93 18.03 18.13 KM Plot
THCA rs28550285 chr9:36028701 G/A 9.08E-6 472 15.9 15.08 17.93 KM Plot
THCA rs28553536 chr16:20836389 G/A 9.16E-5 490 16.37 14.7 17.65 KM Plot
THCA rs28559899 chr7:76410149 G/A 2.87E-9 483 15.32 16.87 15.15 KM Plot
THCA rs28568756 chr15:41539371 G/A 0.000222 486 15.17 15.93 16.83 KM Plot